No. words: 575; after pruning: 549


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    1   -0.4 -0.4 (1,1:241)  207  3.73 0.00 0.41  BE446403Td07P078D02P108B031F1_041.ab1        1   241 (20)  C BE446403Td07P078D02P108B031R1_041.ab1   (73)   241     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.4       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  94 nodes

 49 str. conn. components

Path
    1  C BE446403Td07P078D02P108B031R1_041.ab1   314 
  302    BE446403Td07P078D02P108B031F1_041.ab1   230 
Contig length: old 333, new 333

Contig length: old 333, new 334
New start: 0 
I Change at: 299; seg lengths: entry 1, contig 0