No. words: 1089; after pruning: 1063


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:424)  408  0.24 0.24 0.24  BE471274Ld01P067G01P067G071F1_031.ab1        1   425 (159)  C BE471274Ld01P067G01P067G071R1_031.ab1   (80)   425     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C BE471274Ld01P067G01P067G071R1_031.ab1   505 
  102    BE471274Ld01P067G01P067G071F1_031.ab1    21 
  110  C BE471274Ld01P067G01P067G071R1_031.ab1   396 
  149    BE471274Ld01P067G01P067G071F1_031.ab1    68 
  153  C BE471274Ld01P067G01P067G071R1_031.ab1   353 
  157    BE471274Ld01P067G01P067G071F1_031.ab1    76 
  161  C BE471274Ld01P067G01P067G071R1_031.ab1   345 
  297    BE471274Ld01P067G01P067G071F1_031.ab1   216 
  309  C BE471274Ld01P067G01P067G071R1_031.ab1   197 
  365    BE471274Ld01P067G01P067G071F1_031.ab1   284 
  381  C BE471274Ld01P067G01P067G071R1_031.ab1   125 
  401    BE471274Ld01P067G01P067G071F1_031.ab1   320 
  409  C BE471274Ld01P067G01P067G071R1_031.ab1    97 
  417    BE471274Ld01P067G01P067G071F1_031.ab1   336 
  425  C BE471274Ld01P067G01P067G071R1_031.ab1    81 
  433    BE471274Ld01P067G01P067G071F1_031.ab1   352 
  441  C BE471274Ld01P067G01P067G071R1_031.ab1    65 
  449    BE471274Ld01P067G01P067G071F1_031.ab1   368 
  469  C BE471274Ld01P067G01P067G071R1_031.ab1    37 
  493    BE471274Ld01P067G01P067G071F1_031.ab1   412 
Contig length: old 664, new 665

Contig length: old 665, new 665
New start: 0