No. words: 1170; after pruning: 1144


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:424)  411  0.00 0.24 0.24  BE471274Ld03P067G01P067G071F1_027.ab1        1   425 (174)  C BE471274Ld03P067G01P067G071R1_027.ab1   (146)   425     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BE471274Ld03P067G01P067G071R1_027.ab1   571 
  180    BE471274Ld03P067G01P067G071F1_027.ab1    33 
  196  C BE471274Ld03P067G01P067G071R1_027.ab1   376 
  212    BE471274Ld03P067G01P067G071F1_027.ab1    65 
  228  C BE471274Ld03P067G01P067G071R1_027.ab1   344 
  240    BE471274Ld03P067G01P067G071F1_027.ab1    93 
  248  C BE471274Ld03P067G01P067G071R1_027.ab1   324 
  252    BE471274Ld03P067G01P067G071F1_027.ab1   105 
  260  C BE471274Ld03P067G01P067G071R1_027.ab1   312 
  272    BE471274Ld03P067G01P067G071F1_027.ab1   125 
  316  C BE471274Ld03P067G01P067G071R1_027.ab1   256 
  320    BE471274Ld03P067G01P067G071F1_027.ab1   173 
  344  C BE471274Ld03P067G01P067G071R1_027.ab1   228 
  348    BE471274Ld03P067G01P067G071F1_027.ab1   201 
  408  C BE471274Ld03P067G01P067G071R1_027.ab1   164 
  440    BE471274Ld03P067G01P067G071F1_027.ab1   293 
  508  C BE471274Ld03P067G01P067G071R1_027.ab1    64 
  512    BE471274Ld03P067G01P067G071F1_027.ab1   365 
  540  C BE471274Ld03P067G01P067G071R1_027.ab1    32 
  544    BE471274Ld03P067G01P067G071F1_027.ab1   397 
  552  C BE471274Ld03P067G01P067G071R1_027.ab1    20 
  556    BE471274Ld03P067G01P067G071F1_027.ab1   409 
Contig length: old 745, new 746

Contig length: old 746, new 746
New start: 0