No. words: 1144; after pruning: 1118


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:417)  409  0.00 0.24 0.00  BE471274Ld05P067G01P067G071F1_023.ab1        1   418 (166)  C BE471274Ld05P067G01P067G071R1_023.ab1   (141)   419     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BE471274Ld05P067G01P067G071R1_023.ab1   560 
  167    BE471274Ld05P067G01P067G071F1_023.ab1    25 
  191  C BE471274Ld05P067G01P067G071R1_023.ab1   370 
  211    BE471274Ld05P067G01P067G071F1_023.ab1    69 
  219  C BE471274Ld05P067G01P067G071R1_023.ab1   342 
  295    BE471274Ld05P067G01P067G071F1_023.ab1   153 
  307  C BE471274Ld05P067G01P067G071R1_023.ab1   254 
  327    BE471274Ld05P067G01P067G071F1_023.ab1   185 
  339  C BE471274Ld05P067G01P067G071R1_023.ab1   222 
  347    BE471274Ld05P067G01P067G071F1_023.ab1   205 
  351  C BE471274Ld05P067G01P067G071R1_023.ab1   210 
  383    BE471274Ld05P067G01P067G071F1_023.ab1   241 
  395  C BE471274Ld05P067G01P067G071R1_023.ab1   166 
  411    BE471274Ld05P067G01P067G071F1_023.ab1   269 
  415  C BE471274Ld05P067G01P067G071R1_023.ab1   146 
  427    BE471274Ld05P067G01P067G071F1_023.ab1   285 
  431  C BE471274Ld05P067G01P067G071R1_023.ab1   130 
  451    BE471274Ld05P067G01P067G071F1_023.ab1   309 
  467  C BE471274Ld05P067G01P067G071R1_023.ab1    94 
  471    BE471274Ld05P067G01P067G071F1_023.ab1   329 
  531  C BE471274Ld05P067G01P067G071R1_023.ab1    30 
  543    BE471274Ld05P067G01P067G071F1_023.ab1   401 
Contig length: old 726, new 726

Contig length: old 726, new 726
New start: 0