No. words: 1169; after pruning: 1129


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:418)  408  0.24 0.00 0.24  BE471274Ld06P067G01P067G071F1_021.ab1        1   419 (178)  C BE471274Ld06P067G01P067G071R1_021.ab1   (154)   418     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C BE471274Ld06P067G01P067G071R1_021.ab1   572 
  170    BE471274Ld06P067G01P067G071F1_021.ab1    16 
  178  C BE471274Ld06P067G01P067G071R1_021.ab1   395 
  182    BE471274Ld06P067G01P067G071F1_021.ab1    28 
  204  C BE471274Ld06P067G01P067G071R1_021.ab1   369 
  216    BE471274Ld06P067G01P067G071F1_021.ab1    62 
  220  C BE471274Ld06P067G01P067G071R1_021.ab1   353 
  248    BE471274Ld06P067G01P067G071F1_021.ab1    94 
  256  C BE471274Ld06P067G01P067G071R1_021.ab1   317 
  280    BE471274Ld06P067G01P067G071F1_021.ab1   126 
  320  C BE471274Ld06P067G01P067G071R1_021.ab1   253 
  324    BE471274Ld06P067G01P067G071F1_021.ab1   170 
  332  C BE471274Ld06P067G01P067G071R1_021.ab1   241 
  336    BE471274Ld06P067G01P067G071F1_021.ab1   182 
  348  C BE471274Ld06P067G01P067G071R1_021.ab1   225 
  364    BE471274Ld06P067G01P067G071F1_021.ab1   210 
  384  C BE471274Ld06P067G01P067G071R1_021.ab1   189 
  392    BE471274Ld06P067G01P067G071F1_021.ab1   238 
  400  C BE471274Ld06P067G01P067G071R1_021.ab1   173 
  432    BE471274Ld06P067G01P067G071F1_021.ab1   278 
  456  C BE471274Ld06P067G01P067G071R1_021.ab1   117 
  460    BE471274Ld06P067G01P067G071F1_021.ab1   306 
  508  C BE471274Ld06P067G01P067G071R1_021.ab1    65 
  516    BE471274Ld06P067G01P067G071F1_021.ab1   362 
  540  C BE471274Ld06P067G01P067G071R1_021.ab1    33 
  556    BE471274Ld06P067G01P067G071F1_021.ab1   402 
Contig length: old 750, new 751

Contig length: old 751, new 751
New start: 0