No. words: 1253; after pruning: 1227


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.9 (1,1:468)  455  0.00 0.21 0.21  BE488378Ld01P103H03P103H091F1_044.ab1        1   468 (166)  C BE488378Ld01P103H03P103H091R1_044.ab1   (150)   469     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE488378Ld01P103H03P103H091R1_044.ab1   619 
  310    BE488378Ld01P103H03P103H091F1_044.ab1   159 
  330  C BE488378Ld01P103H03P103H091R1_044.ab1   290 
  458    BE488378Ld01P103H03P103H091F1_044.ab1   307 
Contig length: old 784, new 785

Contig length: old 785, new 785
New start: 0