No. words: 1241; after pruning: 1215


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:455)  439  0.22 0.44 0.00  BE488378Ld07P103H03P103H091F1_080.ab1        1   455 (150)  C BE488378Ld07P103H03P103H091R1_080.ab1   (179)   457     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C BE488378Ld07P103H03P103H091R1_080.ab1   636 
  240    BE488378Ld07P103H03P103H091F1_080.ab1    59 
  244  C BE488378Ld07P103H03P103H091R1_080.ab1   393 
  292    BE488378Ld07P103H03P103H091F1_080.ab1   111 
  296  C BE488378Ld07P103H03P103H091R1_080.ab1   341 
  300    BE488378Ld07P103H03P103H091F1_080.ab1   119 
  452  C BE488378Ld07P103H03P103H091R1_080.ab1   185 
  460    BE488378Ld07P103H03P103H091F1_080.ab1   279 
  464  C BE488378Ld07P103H03P103H091R1_080.ab1   173 
  480    BE488378Ld07P103H03P103H091F1_080.ab1   299 
Contig length: old 785, new 786

Contig length: old 786, new 786
New start: 0