No. words: 1014; after pruning: 988


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:457)  443  0.44 0.22 0.00  BE488378Tu02P103H03P103H091F1_036.ab1        1   458 (51)  C BE488378Tu02P103H03P103H091R1_036.ab1   (46)   459     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C BE488378Tu02P103H03P103H091R1_036.ab1   505 
  174    BE488378Tu02P103H03P103H091F1_036.ab1   127 
  218  C BE488378Tu02P103H03P103H091R1_036.ab1   288 
  222    BE488378Tu02P103H03P103H091F1_036.ab1   175 
  238  C BE488378Tu02P103H03P103H091R1_036.ab1   268 
  274    BE488378Tu02P103H03P103H091F1_036.ab1   227 
  314  C BE488378Tu02P103H03P103H091R1_036.ab1   192 
  350    BE488378Tu02P103H03P103H091F1_036.ab1   303 
  402  C BE488378Tu02P103H03P103H091R1_036.ab1   104 
  414    BE488378Tu02P103H03P103H091F1_036.ab1   367 
Contig length: old 556, new 556

Contig length: old 556, new 556
New start: 0