No. words: 1308; after pruning: 1282


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:598)  562  1.34 0.00 0.00  BE488432As01P129A04P129A101F1_074.ab1        1   599 (63)  C BE488432As01P129A04P129A101R1_074.ab1   (47)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE488432As01P129A04P129A101R1_074.ab1   646 
  115    BE488432As01P129A04P129A101F1_074.ab1    68 
  119  C BE488432As01P129A04P129A101R1_074.ab1   528 
  127    BE488432As01P129A04P129A101F1_074.ab1    80 
  131  C BE488432As01P129A04P129A101R1_074.ab1   516 
  171    BE488432As01P129A04P129A101F1_074.ab1   124 
  175  C BE488432As01P129A04P129A101R1_074.ab1   472 
  195    BE488432As01P129A04P129A101F1_074.ab1   148 
  203  C BE488432As01P129A04P129A101R1_074.ab1   444 
  207    BE488432As01P129A04P129A101F1_074.ab1   160 
  215  C BE488432As01P129A04P129A101R1_074.ab1   432 
  251    BE488432As01P129A04P129A101F1_074.ab1   204 
  515  C BE488432As01P129A04P129A101R1_074.ab1   132 
  539    BE488432As01P129A04P129A101F1_074.ab1   492 
Contig length: old 709, new 709

Contig length: old 709, new 709
New start: 0