No. words: 1265; after pruning: 1239


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:558)  525  1.25 0.00 0.00  BE488432As02P129A04P129A101F1_072.ab1        1   559 (106)  C BE488432As02P129A04P129A101R1_072.ab1   (41)   559     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C BE488432As02P129A04P129A101R1_072.ab1   600 
  154    BE488432As02P129A04P129A101F1_072.ab1   113 
  158  C BE488432As02P129A04P129A101R1_072.ab1   443 
  174    BE488432As02P129A04P129A101F1_072.ab1   133 
  178  C BE488432As02P129A04P129A101R1_072.ab1   423 
  194    BE488432As02P129A04P129A101F1_072.ab1   153 
  202  C BE488432As02P129A04P129A101R1_072.ab1   399 
  206    BE488432As02P129A04P129A101F1_072.ab1   165 
  326  C BE488432As02P129A04P129A101R1_072.ab1   275 
  538    BE488432As02P129A04P129A101F1_072.ab1   497 
Contig length: old 706, new 706

Contig length: old 706, new 706
New start: 0