No. words: 1310; after pruning: 1284


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:603)  585  0.33 0.00 0.00  BE488432Tu01P129A04P129A101F1_078.ab1        1   604 (58)  C BE488432Tu01P129A04P129A101R1_078.ab1   (44)   604     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C BE488432Tu01P129A04P129A101R1_078.ab1   648 
  112    BE488432Tu01P129A04P129A101F1_078.ab1    68 
  116  C BE488432Tu01P129A04P129A101R1_078.ab1   533 
  120    BE488432Tu01P129A04P129A101F1_078.ab1    76 
  128  C BE488432Tu01P129A04P129A101R1_078.ab1   521 
  152    BE488432Tu01P129A04P129A101F1_078.ab1   108 
  156  C BE488432Tu01P129A04P129A101R1_078.ab1   493 
  160    BE488432Tu01P129A04P129A101F1_078.ab1   116 
  180  C BE488432Tu01P129A04P129A101R1_078.ab1   469 
  184    BE488432Tu01P129A04P129A101F1_078.ab1   140 
  200  C BE488432Tu01P129A04P129A101R1_078.ab1   449 
  204    BE488432Tu01P129A04P129A101F1_078.ab1   160 
  264  C BE488432Tu01P129A04P129A101R1_078.ab1   385 
  328    BE488432Tu01P129A04P129A101F1_078.ab1   284 
Contig length: old 706, new 706

Contig length: old 706, new 706
New start: 0