No. words: 1337; after pruning: 1311


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.1 (1,1:501)  491  0.00 0.20 0.20  BE488609Ld03P103B04P103B101F2_068.ab1        2   502 (160)  C BE488609Ld03P103B04P103B101R2_068.ab1   (174)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE488609Ld03P103B04P103B101R2_068.ab1   675 
  316    BE488609Ld03P103B04P103B101F2_068.ab1   142 
  324  C BE488609Ld03P103B04P103B101R2_068.ab1   352 
  328    BE488609Ld03P103B04P103B101F2_068.ab1   154 
  368  C BE488609Ld03P103B04P103B101R2_068.ab1   308 
  380    BE488609Ld03P103B04P103B101F2_068.ab1   206 
Contig length: old 835, new 836

Contig length: old 836, new 836
New start: 0