No. words: 1276; after pruning: 1250


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 4.8 (1,1:503)  490  0.00 0.20 0.20  BE488609Ld17P103B04P103B101F1_030.ab1        4   504 (131)  C BE488609Ld17P103B04P103B101R1_030.ab1   (140)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE488609Ld17P103B04P103B101R1_030.ab1   641 
  270    BE488609Ld17P103B04P103B101F1_030.ab1   132 
  278  C BE488609Ld17P103B04P103B101R1_030.ab1   364 
  286    BE488609Ld17P103B04P103B101F1_030.ab1   148 
  330  C BE488609Ld17P103B04P103B101R1_030.ab1   312 
  342    BE488609Ld17P103B04P103B101F1_030.ab1   204 
  578  C BE488609Ld17P103B04P103B101R1_030.ab1    64 
  582    BE488609Ld17P103B04P103B101F1_030.ab1   444 
Contig length: old 772, new 773

Contig length: old 773, new 773
New start: 0