No. words: 1271; after pruning: 1245


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:495)  486  0.00 0.40 0.00  BE488609Ld19P103B04P103B101F1_026.ab1        1   495 (161)  C BE488609Ld19P103B04P103B101R1_026.ab1   (118)   497     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE488609Ld19P103B04P103B101R1_026.ab1   615 
  196    BE488609Ld19P103B04P103B101F1_026.ab1    76 
  204  C BE488609Ld19P103B04P103B101R1_026.ab1   412 
  256    BE488609Ld19P103B04P103B101F1_026.ab1   136 
  276  C BE488609Ld19P103B04P103B101R1_026.ab1   340 
  280    BE488609Ld19P103B04P103B101F1_026.ab1   160 
  320  C BE488609Ld19P103B04P103B101R1_026.ab1   296 
  328    BE488609Ld19P103B04P103B101F1_026.ab1   208 
Contig length: old 775, new 776

Contig length: old 776, new 776
New start: 0