No. words: 1277; after pruning: 1251


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 5.6 (1,1:503)  490  0.00 0.20 0.20  BE488609Ld25P103B04P103B101F1_045.ab1        4   504 (146)  C BE488609Ld25P103B04P103B101R1_045.ab1   (126)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE488609Ld25P103B04P103B101R1_045.ab1   627 
  328    BE488609Ld25P103B04P103B101F1_045.ab1   204 
  556  C BE488609Ld25P103B04P103B101R1_045.ab1    72 
  560    BE488609Ld25P103B04P103B101F1_045.ab1   436 
Contig length: old 773, new 774

Contig length: old 774, new 774
New start: 0