No. words: 1166; after pruning: 1140


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 9.9 (1,1:525)  514  0.00 0.00 0.00  BE489244Sn28P016F04P038F101F1_063.ab1        1   518 (61)  C BE489244Sn28P016F04P038F101R1_063.ab1   (61)   526     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BE489244Sn28P016F04P038F101R1_063.ab1   587 
  173    BE489244Sn28P016F04P038F101F1_063.ab1   112 
  177  C BE489244Sn28P016F04P038F101R1_063.ab1   411 
  181    BE489244Sn28P016F04P038F101F1_063.ab1   120 
  189  C BE489244Sn28P016F04P038F101R1_063.ab1   399 
  205    BE489244Sn28P016F04P038F101F1_063.ab1   144 
  209  C BE489244Sn28P016F04P038F101R1_063.ab1   379 
  221    BE489244Sn28P016F04P038F101F1_063.ab1   160 
  237  C BE489244Sn28P016F04P038F101R1_063.ab1   351 
  241    BE489244Sn28P016F04P038F101F1_063.ab1   180 
  261  C BE489244Sn28P016F04P038F101R1_063.ab1   327 
  301    BE489244Sn28P016F04P038F101F1_063.ab1   240 
  325  C BE489244Sn28P016F04P038F101R1_063.ab1   263 
  349    BE489244Sn28P016F04P038F101F1_063.ab1   288 
  353  C BE489244Sn28P016F04P038F101R1_063.ab1   235 
  389    BE489244Sn28P016F04P038F101F1_063.ab1   328 
  397  C BE489244Sn28P016F04P038F101R1_063.ab1   191 
  429    BE489244Sn28P016F04P038F101F1_063.ab1   368 
  437  C BE489244Sn28P016F04P038F101R1_063.ab1   151 
  453    BE489244Sn28P016F04P038F101F1_063.ab1   392 
  489  C BE489244Sn28P016F04P038F101R1_063.ab1    99 
  493    BE489244Sn28P016F04P038F101F1_063.ab1   432 
  505  C BE489244Sn28P016F04P038F101R1_063.ab1    83 
  509    BE489244Sn28P016F04P038F101F1_063.ab1   448 
  521  C BE489244Sn28P016F04P038F101R1_063.ab1    67 
  525    BE489244Sn28P016F04P038F101F1_063.ab1   464 
  545  C BE489244Sn28P016F04P038F101R1_063.ab1    43 
  557    BE489244Sn28P016F04P038F101F1_063.ab1   496 
Contig length: old 640, new 640

Contig length: old 640, new 640
New start: 0