No. words: 1141; after pruning: 1115


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:508)  491  0.98 0.00 0.00  BE489244Ta15P016F04P038F101F1_093.ab1        1   509 (64)  C BE489244Ta15P016F04P038F101R1_093.ab1   (59)   509     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C BE489244Ta15P016F04P038F101R1_093.ab1   568 
  220    BE489244Ta15P016F04P038F101F1_093.ab1   161 
  224  C BE489244Ta15P016F04P038F101R1_093.ab1   345 
  280    BE489244Ta15P016F04P038F101F1_093.ab1   221 
  288  C BE489244Ta15P016F04P038F101R1_093.ab1   281 
  440    BE489244Ta15P016F04P038F101F1_093.ab1   381 
  444  C BE489244Ta15P016F04P038F101R1_093.ab1   125 
  460    BE489244Ta15P016F04P038F101F1_093.ab1   401 
  472  C BE489244Ta15P016F04P038F101R1_093.ab1    97 
  488    BE489244Ta15P016F04P038F101F1_093.ab1   429 
  496  C BE489244Ta15P016F04P038F101R1_093.ab1    73 
  500    BE489244Ta15P016F04P038F101F1_093.ab1   441 
  512  C BE489244Ta15P016F04P038F101R1_093.ab1    57 
  520    BE489244Ta15P016F04P038F101F1_093.ab1   461 
Contig length: old 632, new 632

Contig length: old 632, new 632
New start: 0