No. words: 1189; after pruning: 1125


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.0 (1,1:379)  355  0.26 0.53 0.00  BE489244Ta15P038G10P016F101F1_004.ab1        1   379 (376)  C BE489244Ta15P038G10P016F101R1_004.ab1   (53)   381     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C BE489244Ta15P038G10P016F101R1_004.ab1   434 
   81    BE489244Ta15P038G10P016F101F1_004.ab1    27 
   85  C BE489244Ta15P038G10P016F101R1_004.ab1   350 
  122    BE489244Ta15P038G10P016F101F1_004.ab1    67 
  132  C BE489244Ta15P038G10P016F101R1_004.ab1   303 
  136    BE489244Ta15P038G10P016F101F1_004.ab1    81 
  140  C BE489244Ta15P038G10P016F101R1_004.ab1   295 
  184    BE489244Ta15P038G10P016F101F1_004.ab1   129 
  188  C BE489244Ta15P038G10P016F101R1_004.ab1   247 
  196    BE489244Ta15P038G10P016F101F1_004.ab1   141 
  204  C BE489244Ta15P038G10P016F101R1_004.ab1   231 
  208    BE489244Ta15P038G10P016F101F1_004.ab1   153 
  212  C BE489244Ta15P038G10P016F101R1_004.ab1   223 
  224    BE489244Ta15P038G10P016F101F1_004.ab1   169 
  304  C BE489244Ta15P038G10P016F101R1_004.ab1   131 
  332    BE489244Ta15P038G10P016F101F1_004.ab1   277 
  336  C BE489244Ta15P038G10P016F101R1_004.ab1    99 
  356    BE489244Ta15P038G10P016F101F1_004.ab1   301 
  360  C BE489244Ta15P038G10P016F101R1_004.ab1    75 
  376    BE489244Ta15P038G10P016F101F1_004.ab1   321 
  384  C BE489244Ta15P038G10P016F101R1_004.ab1    51 
  428    BE489244Ta15P038G10P016F101F1_004.ab1   373 
Contig length: old 809, new 810

Contig length: old 810, new 810
New start: 0 
S Change at: 501; seg lengths: entry 3, contig 3
S Change at: 508; seg lengths: entry 4, contig 4
S Change at: 525; seg lengths: entry 1, contig 1