No. words: 1142; after pruning: 1116


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 10.7 (1,1:513)  499  0.00 0.00 0.00  BE489244Ta18P016F04P038F101F1_087.ab1        1   503 (61)  C BE489244Ta18P016F04P038F101R1_087.ab1   (64)   514    12 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C BE489244Ta18P016F04P038F101R1_087.ab1   578 
  276    BE489244Ta18P016F04P038F101F1_087.ab1   212 
  324  C BE489244Ta18P016F04P038F101R1_087.ab1   255 
  424    BE489244Ta18P016F04P038F101F1_087.ab1   360 
  428  C BE489244Ta18P016F04P038F101R1_087.ab1   151 
  468    BE489244Ta18P016F04P038F101F1_087.ab1   404 
  520  C BE489244Ta18P016F04P038F101R1_087.ab1    59 
  552    BE489244Ta18P016F04P038F101F1_087.ab1   488 
Contig length: old 628, new 628

Contig length: old 628, new 628
New start: 0