No. words: 1082; after pruning: 1056


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:453)  439  0.88 0.00 0.00  BE489244Ta22P016F04P038F101F1_094.ab1        1   454 (63)  C BE489244Ta22P016F04P038F101R1_094.ab1   (111)   454     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BE489244Ta22P016F04P038F101R1_094.ab1   565 
  284    BE489244Ta22P016F04P038F101F1_094.ab1   173 
  308  C BE489244Ta22P016F04P038F101R1_094.ab1   258 
  424    BE489244Ta22P016F04P038F101F1_094.ab1   313 
  436  C BE489244Ta22P016F04P038F101R1_094.ab1   130 
  448    BE489244Ta22P016F04P038F101F1_094.ab1   337 
  476  C BE489244Ta22P016F04P038F101R1_094.ab1    90 
  484    BE489244Ta22P016F04P038F101F1_094.ab1   373 
  516  C BE489244Ta22P016F04P038F101R1_094.ab1    50 
  524    BE489244Ta22P016F04P038F101F1_094.ab1   413 
Contig length: old 628, new 628

Contig length: old 628, new 628
New start: 0