No. words: 1273; after pruning: 1247


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 11.7 (1,1:590)  569  0.00 0.17 0.00  BE489326Sn27P088G12P034G031F1_053.ab1        7   587 (55)  C BE489326Sn27P088G12P034G031R1_053.ab1   (45)   586     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C BE489326Sn27P088G12P034G031R1_053.ab1   631 
  101    BE489326Sn27P088G12P034G031F1_053.ab1    61 
  137  C BE489326Sn27P088G12P034G031R1_053.ab1   495 
  389    BE489326Sn27P088G12P034G031F1_053.ab1   349 
  413  C BE489326Sn27P088G12P034G031R1_053.ab1   219 
  517    BE489326Sn27P088G12P034G031F1_053.ab1   477 
  529  C BE489326Sn27P088G12P034G031R1_053.ab1   103 
  537    BE489326Sn27P088G12P034G031F1_053.ab1   497 
  541  C BE489326Sn27P088G12P034G031R1_053.ab1    91 
  549    BE489326Sn27P088G12P034G031F1_053.ab1   509 
  561  C BE489326Sn27P088G12P034G031R1_053.ab1    71 
  573    BE489326Sn27P088G12P034G031F1_053.ab1   533 
Contig length: old 682, new 682

Contig length: old 682, new 682
New start: 0