No. words: 1272; after pruning: 1246


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:585)  578  0.00 0.00 0.00  BE489326Sn29P088G12P034G031F1_051.ab1        1   586 (52)  C BE489326Sn29P088G12P034G031R1_051.ab1   (48)   586     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE489326Sn29P088G12P034G031R1_051.ab1   634 
  500    BE489326Sn29P088G12P034G031F1_051.ab1   452 
  508  C BE489326Sn29P088G12P034G031R1_051.ab1   127 
  524    BE489326Sn29P088G12P034G031F1_051.ab1   476 
  528  C BE489326Sn29P088G12P034G031R1_051.ab1   107 
  556    BE489326Sn29P088G12P034G031F1_051.ab1   508 
  560  C BE489326Sn29P088G12P034G031R1_051.ab1    75 
  584    BE489326Sn29P088G12P034G031F1_051.ab1   536 
  592  C BE489326Sn29P088G12P034G031R1_051.ab1    43 
  620    BE489326Sn29P088G12P034G031F1_051.ab1   572 
Contig length: old 686, new 686

Contig length: old 686, new 686
New start: 0