No. words: 1028; after pruning: 1002


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -1.1 -1.1 (1,1:239)  263  9.95 0.51 0.00  BE489326Sn30P034G03P003C051F1_061.ab1      242   633 (1)    BE489326Sn30P034G03P003C051R1_061.ab1        1   394 (0) *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.1       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  102 nodes

 53 str. conn. components

Path
    1    BE489326Sn30P034G03P003C051F1_061.ab1     1 
Contig length: old 634, new 634

Contig length: old 634, new 634
New start: 0