No. words: 1098; after pruning: 1072


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.0 (1,1:511)  479  0.00 0.00 0.39  BE489326Sn31P088G04P003C111F1_049.ab1        1   510 (32)  C BE489326Sn31P088G04P003C111R1_049.ab1   (45)   511     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BE489326Sn31P088G04P003C111R1_049.ab1   556 
  137    BE489326Sn31P088G04P003C111F1_049.ab1    92 
  149  C BE489326Sn31P088G04P003C111R1_049.ab1   408 
  405    BE489326Sn31P088G04P003C111F1_049.ab1   360 
  429  C BE489326Sn31P088G04P003C111R1_049.ab1   128 
  445    BE489326Sn31P088G04P003C111F1_049.ab1   400 
Contig length: old 586, new 587

Contig length: old 587, new 587
New start: 0