No. words: 1263; after pruning: 1237


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:579)  572  0.00 0.00 0.00  BE489326Ta12P088G12P034G031F1_038.ab1        1   580 (57)  C BE489326Ta12P088G12P034G031R1_038.ab1   (46)   580     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE489326Ta12P088G12P034G031R1_038.ab1   626 
   90    BE489326Ta12P088G12P034G031F1_038.ab1    44 
   94  C BE489326Ta12P088G12P034G031R1_038.ab1   533 
  458    BE489326Ta12P088G12P034G031F1_038.ab1   412 
  462  C BE489326Ta12P088G12P034G031R1_038.ab1   165 
  502    BE489326Ta12P088G12P034G031F1_038.ab1   456 
  510  C BE489326Ta12P088G12P034G031R1_038.ab1   117 
  518    BE489326Ta12P088G12P034G031F1_038.ab1   472 
  530  C BE489326Ta12P088G12P034G031R1_038.ab1    97 
  538    BE489326Ta12P088G12P034G031F1_038.ab1   492 
  542  C BE489326Ta12P088G12P034G031R1_038.ab1    85 
  550    BE489326Ta12P088G12P034G031F1_038.ab1   504 
  558  C BE489326Ta12P088G12P034G031R1_038.ab1    69 
  570    BE489326Ta12P088G12P034G031F1_038.ab1   524 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0