No. words: 1271; after pruning: 1245


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 12.7 (1,1:586)  573  0.00 0.00 0.00  BE489326Ta13P088G12P034G031F1_035.ab1        7   587 (57)  C BE489326Ta13P088G12P034G031R1_035.ab1   (46)   581     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE489326Ta13P088G12P034G031R1_035.ab1   627 
  386    BE489326Ta13P088G12P034G031F1_035.ab1   346 
  414  C BE489326Ta13P088G12P034G031R1_035.ab1   214 
  458    BE489326Ta13P088G12P034G031F1_035.ab1   418 
  466  C BE489326Ta13P088G12P034G031R1_035.ab1   162 
  498    BE489326Ta13P088G12P034G031F1_035.ab1   458 
  526  C BE489326Ta13P088G12P034G031R1_035.ab1   102 
  550    BE489326Ta13P088G12P034G031F1_035.ab1   510 
Contig length: old 684, new 684

Contig length: old 684, new 684
New start: 0