No. words: 1276; after pruning: 1250


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.9 (1,1:587)  575  0.00 0.17 0.00  BE489326Ta14P088G12P034G031F1_036.ab1        1   587 (50)  C BE489326Ta14P088G12P034G031R1_036.ab1   (50)   589     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE489326Ta14P088G12P034G031R1_036.ab1   639 
  346    BE489326Ta14P088G12P034G031F1_036.ab1   295 
  350  C BE489326Ta14P088G12P034G031R1_036.ab1   290 
  406    BE489326Ta14P088G12P034G031F1_036.ab1   355 
  410  C BE489326Ta14P088G12P034G031R1_036.ab1   230 
  502    BE489326Ta14P088G12P034G031F1_036.ab1   451 
  510  C BE489326Ta14P088G12P034G031R1_036.ab1   130 
  522    BE489326Ta14P088G12P034G031F1_036.ab1   471 
  534  C BE489326Ta14P088G12P034G031R1_036.ab1   106 
  542    BE489326Ta14P088G12P034G031F1_036.ab1   491 
  546  C BE489326Ta14P088G12P034G031R1_036.ab1    94 
  554    BE489326Ta14P088G12P034G031F1_036.ab1   503 
  562  C BE489326Ta14P088G12P034G031R1_036.ab1    78 
  586    BE489326Ta14P088G12P034G031F1_036.ab1   535 
  594  C BE489326Ta14P088G12P034G031R1_036.ab1    46 
  606    BE489326Ta14P088G12P034G031F1_036.ab1   555 
  614  C BE489326Ta14P088G12P034G031R1_036.ab1    26 
  622    BE489326Ta14P088G12P034G031F1_036.ab1   571 
Contig length: old 688, new 688

Contig length: old 688, new 688
New start: 0