No. words: 1271; after pruning: 1245


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 12.3 (1,1:588)  573  0.00 0.00 0.00  BE489326Ta16P088G12P034G031F1_034.ab1        9   589 (55)  C BE489326Ta16P088G12P034G031R1_034.ab1   (46)   581     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE489326Ta16P088G12P034G031R1_034.ab1   627 
   90    BE489326Ta16P088G12P034G031F1_034.ab1    52 
  102  C BE489326Ta16P088G12P034G031R1_034.ab1   526 
  462    BE489326Ta16P088G12P034G031F1_034.ab1   424 
  466  C BE489326Ta16P088G12P034G031R1_034.ab1   162 
  522    BE489326Ta16P088G12P034G031F1_034.ab1   484 
  530  C BE489326Ta16P088G12P034G031R1_034.ab1    98 
  554    BE489326Ta16P088G12P034G031F1_034.ab1   516 
  558  C BE489326Ta16P088G12P034G031R1_034.ab1    70 
  574    BE489326Ta16P088G12P034G031F1_034.ab1   536 
  598  C BE489326Ta16P088G12P034G031R1_034.ab1    30 
  606    BE489326Ta16P088G12P034G031F1_034.ab1   568 
  610  C BE489326Ta16P088G12P034G031R1_034.ab1    18 
  618    BE489326Ta16P088G12P034G031F1_034.ab1   580 
Contig length: old 682, new 682

Contig length: old 682, new 682
New start: 0