No. words: 1266; after pruning: 1240


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:582)  575  0.00 0.00 0.00  BE489326Ta19P088G12P034G031F1_061.ab1        1   583 (54)  C BE489326Ta19P088G12P034G031R1_061.ab1   (46)   583     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE489326Ta19P088G12P034G031R1_061.ab1   629 
   94    BE489326Ta19P088G12P034G031F1_061.ab1    48 
  110  C BE489326Ta19P088G12P034G031R1_061.ab1   520 
  118    BE489326Ta19P088G12P034G031F1_061.ab1    72 
  126  C BE489326Ta19P088G12P034G031R1_061.ab1   504 
  130    BE489326Ta19P088G12P034G031F1_061.ab1    84 
  138  C BE489326Ta19P088G12P034G031R1_061.ab1   492 
  146    BE489326Ta19P088G12P034G031F1_061.ab1   100 
  150  C BE489326Ta19P088G12P034G031R1_061.ab1   480 
  166    BE489326Ta19P088G12P034G031F1_061.ab1   120 
  178  C BE489326Ta19P088G12P034G031R1_061.ab1   452 
  202    BE489326Ta19P088G12P034G031F1_061.ab1   156 
  222  C BE489326Ta19P088G12P034G031R1_061.ab1   408 
  246    BE489326Ta19P088G12P034G031F1_061.ab1   200 
  254  C BE489326Ta19P088G12P034G031R1_061.ab1   376 
  262    BE489326Ta19P088G12P034G031F1_061.ab1   216 
  270  C BE489326Ta19P088G12P034G031R1_061.ab1   360 
  338    BE489326Ta19P088G12P034G031F1_061.ab1   292 
  354  C BE489326Ta19P088G12P034G031R1_061.ab1   276 
  366    BE489326Ta19P088G12P034G031F1_061.ab1   320 
  382  C BE489326Ta19P088G12P034G031R1_061.ab1   248 
  386    BE489326Ta19P088G12P034G031F1_061.ab1   340 
  398  C BE489326Ta19P088G12P034G031R1_061.ab1   232 
  418    BE489326Ta19P088G12P034G031F1_061.ab1   372 
  422  C BE489326Ta19P088G12P034G031R1_061.ab1   208 
  458    BE489326Ta19P088G12P034G031F1_061.ab1   412 
  462  C BE489326Ta19P088G12P034G031R1_061.ab1   168 
  482    BE489326Ta19P088G12P034G031F1_061.ab1   436 
  486  C BE489326Ta19P088G12P034G031R1_061.ab1   144 
  502    BE489326Ta19P088G12P034G031F1_061.ab1   456 
  510  C BE489326Ta19P088G12P034G031R1_061.ab1   120 
  514    BE489326Ta19P088G12P034G031F1_061.ab1   468 
  518  C BE489326Ta19P088G12P034G031R1_061.ab1   112 
  522    BE489326Ta19P088G12P034G031F1_061.ab1   476 
  566  C BE489326Ta19P088G12P034G031R1_061.ab1    64 
  570    BE489326Ta19P088G12P034G031F1_061.ab1   524 
  574  C BE489326Ta19P088G12P034G031R1_061.ab1    56 
  578    BE489326Ta19P088G12P034G031F1_061.ab1   532 
  602  C BE489326Ta19P088G12P034G031R1_061.ab1    28 
  618    BE489326Ta19P088G12P034G031F1_061.ab1   572 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0