No. words: 1257; after pruning: 1231


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 11.9 (1,1:574)  560  0.00 0.00 0.00  BE489326Ta21P088G12P034G031F1_059.ab1        8   575 (59)  C BE489326Ta21P088G12P034G031R1_059.ab1   (55)   568     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C BE489326Ta21P088G12P034G031R1_059.ab1   623 
  159    BE489326Ta21P088G12P034G031F1_059.ab1   111 
  167  C BE489326Ta21P088G12P034G031R1_059.ab1   457 
  387    BE489326Ta21P088G12P034G031F1_059.ab1   339 
  395  C BE489326Ta21P088G12P034G031R1_059.ab1   229 
  403    BE489326Ta21P088G12P034G031F1_059.ab1   355 
  431  C BE489326Ta21P088G12P034G031R1_059.ab1   193 
  439    BE489326Ta21P088G12P034G031F1_059.ab1   391 
  463  C BE489326Ta21P088G12P034G031R1_059.ab1   161 
  475    BE489326Ta21P088G12P034G031F1_059.ab1   427 
Contig length: old 682, new 682

Contig length: old 682, new 682
New start: 0