No. words: 1281; after pruning: 1255


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 12.7 (1,1:588)  575  0.00 0.00 0.00  BE489326Ta23P088G12P034G031F1_057.ab1        1   583 (64)  C BE489326Ta23P088G12P034G031R1_057.ab1   (45)   589     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE489326Ta23P088G12P034G031R1_057.ab1   634 
   69    BE489326Ta23P088G12P034G031F1_057.ab1    24 
   73  C BE489326Ta23P088G12P034G031R1_057.ab1   562 
   77    BE489326Ta23P088G12P034G031F1_057.ab1    32 
   81  C BE489326Ta23P088G12P034G031R1_057.ab1   554 
  489    BE489326Ta23P088G12P034G031F1_057.ab1   444 
  537  C BE489326Ta23P088G12P034G031R1_057.ab1    98 
  549    BE489326Ta23P088G12P034G031F1_057.ab1   504 
  557  C BE489326Ta23P088G12P034G031R1_057.ab1    78 
  573    BE489326Ta23P088G12P034G031F1_057.ab1   528 
  589  C BE489326Ta23P088G12P034G031R1_057.ab1    46 
  601    BE489326Ta23P088G12P034G031F1_057.ab1   556 
Contig length: old 692, new 692

Contig length: old 692, new 692
New start: 0