No. words: 1269; after pruning: 1243


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 11.8 (1,1:590)  569  0.00 0.17 0.00  BE489326Td04P088G12P034G031F1_046.ab1        7   587 (55)  C BE489326Td04P088G12P034G031R1_046.ab1   (41)   586     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C BE489326Td04P088G12P034G031R1_046.ab1   627 
   53    BE489326Td04P088G12P034G031F1_046.ab1    17 
   61  C BE489326Td04P088G12P034G031R1_046.ab1   567 
   69    BE489326Td04P088G12P034G031F1_046.ab1    33 
  105  C BE489326Td04P088G12P034G031R1_046.ab1   523 
  109    BE489326Td04P088G12P034G031F1_046.ab1    73 
  121  C BE489326Td04P088G12P034G031R1_046.ab1   507 
  125    BE489326Td04P088G12P034G031F1_046.ab1    89 
  129  C BE489326Td04P088G12P034G031R1_046.ab1   499 
  157    BE489326Td04P088G12P034G031F1_046.ab1   121 
  169  C BE489326Td04P088G12P034G031R1_046.ab1   459 
  197    BE489326Td04P088G12P034G031F1_046.ab1   161 
  217  C BE489326Td04P088G12P034G031R1_046.ab1   411 
  221    BE489326Td04P088G12P034G031F1_046.ab1   185 
  233  C BE489326Td04P088G12P034G031R1_046.ab1   395 
  245    BE489326Td04P088G12P034G031F1_046.ab1   209 
  249  C BE489326Td04P088G12P034G031R1_046.ab1   379 
  269    BE489326Td04P088G12P034G031F1_046.ab1   233 
  273  C BE489326Td04P088G12P034G031R1_046.ab1   355 
  333    BE489326Td04P088G12P034G031F1_046.ab1   297 
  345  C BE489326Td04P088G12P034G031R1_046.ab1   283 
  357    BE489326Td04P088G12P034G031F1_046.ab1   321 
  369  C BE489326Td04P088G12P034G031R1_046.ab1   259 
  381    BE489326Td04P088G12P034G031F1_046.ab1   345 
  389  C BE489326Td04P088G12P034G031R1_046.ab1   239 
  425    BE489326Td04P088G12P034G031F1_046.ab1   389 
  433  C BE489326Td04P088G12P034G031R1_046.ab1   195 
  453    BE489326Td04P088G12P034G031F1_046.ab1   417 
  457  C BE489326Td04P088G12P034G031R1_046.ab1   171 
  485    BE489326Td04P088G12P034G031F1_046.ab1   449 
  489  C BE489326Td04P088G12P034G031R1_046.ab1   139 
  493    BE489326Td04P088G12P034G031F1_046.ab1   457 
  509  C BE489326Td04P088G12P034G031R1_046.ab1   119 
  517    BE489326Td04P088G12P034G031F1_046.ab1   481 
  529  C BE489326Td04P088G12P034G031R1_046.ab1    99 
  545    BE489326Td04P088G12P034G031F1_046.ab1   509 
  557  C BE489326Td04P088G12P034G031R1_046.ab1    71 
  569    BE489326Td04P088G12P034G031F1_046.ab1   533 
  585  C BE489326Td04P088G12P034G031R1_046.ab1    43 
  597    BE489326Td04P088G12P034G031F1_046.ab1   561 
  609  C BE489326Td04P088G12P034G031R1_046.ab1    19 
  613    BE489326Td04P088G12P034G031F1_046.ab1   577 
Contig length: old 678, new 678

Contig length: old 678, new 678
New start: 0