No. words: 1278; after pruning: 1252


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   10    0.0 11.6 (1,1:595)  569  0.00 0.17 0.00  BE489326Td10P088G12P034G031F1_040.ab1       12   592 (56)  C BE489326Td10P088G12P034G031R1_040.ab1   (44)   586     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
10       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C BE489326Td10P088G12P034G031R1_040.ab1   630 
   88    BE489326Td10P088G12P034G031F1_040.ab1    54 
  136  C BE489326Td10P088G12P034G031R1_040.ab1   495 
  388    BE489326Td10P088G12P034G031F1_040.ab1   354 
  412  C BE489326Td10P088G12P034G031R1_040.ab1   219 
  516    BE489326Td10P088G12P034G031F1_040.ab1   482 
  592  C BE489326Td10P088G12P034G031R1_040.ab1    39 
  600    BE489326Td10P088G12P034G031F1_040.ab1   566 
Contig length: old 682, new 682

Contig length: old 682, new 682
New start: 0