No. words: 1539; after pruning: 1487


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      4

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.0 (1,1:438)  428  0.23 0.23 0.00  BE490085Ld10P067E02P067E081F1_036.ab1        1   439 (145)  C BE490085Ld10P067E02P067E081R1_036.ab1   (175)   440     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    
 -172  -188  0 571    51     E -50- 0
Fail: (1)   51   -2.1 -2.1 (2,1:12)  107  4.10 0.00 0.00  BE490085Ld10P067E02P067E081R1_036.ab1      478   599 (16)    BE490085Ld10P067E02P067E081R1_027.ab1       52   173 (0) *

Pass: 4
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.1       0        1

Gap   # merges  # failures
 size
51       0        1

Offset
  0       1 

Read equivalence class histogram:
    1    2
    2    1

Chimera merges: 

Merge:(0)   51   -2.1 -2.1 (2,1:12)  107  4.10 0.00 0.00  BE490085Ld10P067E02P067E081R1_036.ab1      478   599 (16)    BE490085Ld10P067E02P067E081R1_027.ab1       52   173 (0) *

Contig 2:  266 nodes

 136 str. conn. components

Path
    1  C BE490085Ld10P067E02P067E081F1_036.ab1   584 
  379    BE490085Ld10P067E02P067E081R1_036.ab1   234 
  419  C BE490085Ld10P067E02P067E081F1_036.ab1   166 
  447    BE490085Ld10P067E02P067E081R1_036.ab1   302 
Contig length: old 760, new 760

Contig 1:  2 nodes

 2 str. conn. components

Path
    1    BE490085Ld10P067E02P067E081F1_027.ab1     1 
Contig length: old 167, new 167

Contig length: old 760, new 760
New start: 0