No. words: 1357; after pruning: 1331


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:515)  503  0.00 0.39 0.00  BE490085Ld14P067E02P067E081F1_019.ab1        1   515 (183)  C BE490085Ld14P067E02P067E081R1_019.ab1   (142)   517     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C BE490085Ld14P067E02P067E081R1_019.ab1   659 
  211    BE490085Ld14P067E02P067E081F1_019.ab1    67 
  215  C BE490085Ld14P067E02P067E081R1_019.ab1   445 
  239    BE490085Ld14P067E02P067E081F1_019.ab1    95 
  243  C BE490085Ld14P067E02P067E081R1_019.ab1   417 
  267    BE490085Ld14P067E02P067E081F1_019.ab1   123 
  271  C BE490085Ld14P067E02P067E081R1_019.ab1   389 
  327    BE490085Ld14P067E02P067E081F1_019.ab1   183 
  335  C BE490085Ld14P067E02P067E081R1_019.ab1   325 
  339    BE490085Ld14P067E02P067E081F1_019.ab1   195 
  347  C BE490085Ld14P067E02P067E081R1_019.ab1   313 
  359    BE490085Ld14P067E02P067E081F1_019.ab1   215 
  367  C BE490085Ld14P067E02P067E081R1_019.ab1   293 
  371    BE490085Ld14P067E02P067E081F1_019.ab1   227 
  379  C BE490085Ld14P067E02P067E081R1_019.ab1   281 
  383    BE490085Ld14P067E02P067E081F1_019.ab1   239 
  403  C BE490085Ld14P067E02P067E081R1_019.ab1   257 
  519    BE490085Ld14P067E02P067E081F1_019.ab1   375 
  523  C BE490085Ld14P067E02P067E081R1_019.ab1   137 
  555    BE490085Ld14P067E02P067E081F1_019.ab1   411 
  559  C BE490085Ld14P067E02P067E081R1_019.ab1   101 
  571    BE490085Ld14P067E02P067E081F1_019.ab1   427 
  587  C BE490085Ld14P067E02P067E081R1_019.ab1    73 
  599    BE490085Ld14P067E02P067E081F1_019.ab1   455 
  603  C BE490085Ld14P067E02P067E081R1_019.ab1    57 
  615    BE490085Ld14P067E02P067E081F1_019.ab1   471 
  631  C BE490085Ld14P067E02P067E081R1_019.ab1    29 
  639    BE490085Ld14P067E02P067E081F1_019.ab1   495 
Contig length: old 841, new 842

Contig length: old 842, new 842
New start: 0