No. words: 1355; after pruning: 1329


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.3 (1,1:511)  481  0.78 0.20 0.39  BE490085Ld15P067E02P067E081F1_017.ab1        4   513 (157)  C BE490085Ld15P067E02P067E081R1_017.ab1   (176)   509     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE490085Ld15P067E02P067E081R1_017.ab1   685 
  215    BE490085Ld15P067E02P067E081F1_017.ab1    41 
  219  C BE490085Ld15P067E02P067E081R1_017.ab1   467 
  247    BE490085Ld15P067E02P067E081F1_017.ab1    73 
  259  C BE490085Ld15P067E02P067E081R1_017.ab1   427 
  279    BE490085Ld15P067E02P067E081F1_017.ab1   105 
  323  C BE490085Ld15P067E02P067E081R1_017.ab1   363 
  351    BE490085Ld15P067E02P067E081F1_017.ab1   177 
  407  C BE490085Ld15P067E02P067E081R1_017.ab1   279 
  435    BE490085Ld15P067E02P067E081F1_017.ab1   261 
  507  C BE490085Ld15P067E02P067E081R1_017.ab1   179 
  511    BE490085Ld15P067E02P067E081F1_017.ab1   337 
  567  C BE490085Ld15P067E02P067E081R1_017.ab1   119 
  579    BE490085Ld15P067E02P067E081F1_017.ab1   405 
Contig length: old 843, new 844

Contig length: old 844, new 844
New start: 0