No. words: 1242; after pruning: 1216


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    5   -2.1 -2.1 (1,1:600)  403  9.32 0.17 0.00  BE490274As01P129C04P129C101F1_076.ab1        6   595 (1)  C BE490274As01P129C04P129C101R1_076.ab1   (50)   596     6 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.1       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  148 nodes

 76 str. conn. components

Path
    1  C BE490274As01P129C04P129C101R1_076.ab1   646 
   54    BE490274As01P129C04P129C101F1_076.ab1     9 
  257  C BE490274As01P129C04P129C101R1_076.ab1   389 
Contig length: old 646, new 645

Contig length: old 645, new 645
New start: 0