No. words: 1524; after pruning: 1498


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:597)  574  0.00 0.17 0.00  BE490274Ld04P129C04P129C101F1_033.ab1        1   598 (177)  C BE490274Ld04P129C04P129C101R1_033.ab1   (150)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C BE490274Ld04P129C04P129C101R1_033.ab1   749 
  207    BE490274Ld04P129C04P129C101F1_033.ab1    56 
  211  C BE490274Ld04P129C04P129C101R1_033.ab1   539 
  247    BE490274Ld04P129C04P129C101F1_033.ab1    96 
  283  C BE490274Ld04P129C04P129C101R1_033.ab1   467 
  287    BE490274Ld04P129C04P129C101F1_033.ab1   136 
  299  C BE490274Ld04P129C04P129C101R1_033.ab1   451 
  315    BE490274Ld04P129C04P129C101F1_033.ab1   164 
  407  C BE490274Ld04P129C04P129C101R1_033.ab1   343 
  411    BE490274Ld04P129C04P129C101F1_033.ab1   260 
  447  C BE490274Ld04P129C04P129C101R1_033.ab1   303 
  475    BE490274Ld04P129C04P129C101F1_033.ab1   324 
  487  C BE490274Ld04P129C04P129C101R1_033.ab1   263 
  543    BE490274Ld04P129C04P129C101F1_033.ab1   392 
  555  C BE490274Ld04P129C04P129C101R1_033.ab1   195 
  567    BE490274Ld04P129C04P129C101F1_033.ab1   416 
  575  C BE490274Ld04P129C04P129C101R1_033.ab1   175 
  579    BE490274Ld04P129C04P129C101F1_033.ab1   428 
  595  C BE490274Ld04P129C04P129C101R1_033.ab1   155 
  599    BE490274Ld04P129C04P129C101F1_033.ab1   448 
  651  C BE490274Ld04P129C04P129C101R1_033.ab1    99 
  655    BE490274Ld04P129C04P129C101F1_033.ab1   504 
Contig length: old 926, new 926

Contig length: old 926, new 926
New start: 0