No. words: 1521; after pruning: 1495


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:597)  573  0.00 0.17 0.00  BE490274Ld05P129C04P129C101F1_048.ab1        1   598 (176)  C BE490274Ld05P129C04P129C101R1_048.ab1   (148)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C BE490274Ld05P129C04P129C101R1_048.ab1   747 
  213    BE490274Ld05P129C04P129C101F1_048.ab1    64 
  221  C BE490274Ld05P129C04P129C101R1_048.ab1   527 
  233    BE490274Ld05P129C04P129C101F1_048.ab1    84 
  237  C BE490274Ld05P129C04P129C101R1_048.ab1   511 
  245    BE490274Ld05P129C04P129C101F1_048.ab1    96 
  289  C BE490274Ld05P129C04P129C101R1_048.ab1   459 
  293    BE490274Ld05P129C04P129C101F1_048.ab1   144 
  297  C BE490274Ld05P129C04P129C101R1_048.ab1   451 
  301    BE490274Ld05P129C04P129C101F1_048.ab1   152 
  445  C BE490274Ld05P129C04P129C101R1_048.ab1   303 
  461    BE490274Ld05P129C04P129C101F1_048.ab1   312 
  493  C BE490274Ld05P129C04P129C101R1_048.ab1   255 
  541    BE490274Ld05P129C04P129C101F1_048.ab1   392 
  565  C BE490274Ld05P129C04P129C101R1_048.ab1   183 
  577    BE490274Ld05P129C04P129C101F1_048.ab1   428 
  581  C BE490274Ld05P129C04P129C101R1_048.ab1   167 
  609    BE490274Ld05P129C04P129C101F1_048.ab1   460 
  625  C BE490274Ld05P129C04P129C101R1_048.ab1   123 
  633    BE490274Ld05P129C04P129C101F1_048.ab1   484 
  645  C BE490274Ld05P129C04P129C101R1_048.ab1   103 
  653    BE490274Ld05P129C04P129C101F1_048.ab1   504 
Contig length: old 923, new 923

Contig length: old 923, new 923
New start: 0