No. words: 1520; after pruning: 1494


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:595)  571  0.00 0.17 0.00  BE490274Ld06P129C04P129C101F1_046.ab1        1   596 (176)  C BE490274Ld06P129C04P129C101R1_046.ab1   (151)   597     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BE490274Ld06P129C04P129C101R1_046.ab1   748 
  202    BE490274Ld06P129C04P129C101F1_046.ab1    50 
  206  C BE490274Ld06P129C04P129C101R1_046.ab1   543 
  214    BE490274Ld06P129C04P129C101F1_046.ab1    62 
  226  C BE490274Ld06P129C04P129C101R1_046.ab1   523 
  246    BE490274Ld06P129C04P129C101F1_046.ab1    94 
  254  C BE490274Ld06P129C04P129C101R1_046.ab1   495 
  258    BE490274Ld06P129C04P129C101F1_046.ab1   106 
  286  C BE490274Ld06P129C04P129C101R1_046.ab1   463 
  290    BE490274Ld06P129C04P129C101F1_046.ab1   138 
  302  C BE490274Ld06P129C04P129C101R1_046.ab1   447 
  310    BE490274Ld06P129C04P129C101F1_046.ab1   158 
  382  C BE490274Ld06P129C04P129C101R1_046.ab1   367 
  386    BE490274Ld06P129C04P129C101F1_046.ab1   234 
  410  C BE490274Ld06P129C04P129C101R1_046.ab1   339 
  414    BE490274Ld06P129C04P129C101F1_046.ab1   262 
  446  C BE490274Ld06P129C04P129C101R1_046.ab1   303 
  458    BE490274Ld06P129C04P129C101F1_046.ab1   306 
  470  C BE490274Ld06P129C04P129C101R1_046.ab1   279 
  478    BE490274Ld06P129C04P129C101F1_046.ab1   326 
  486  C BE490274Ld06P129C04P129C101R1_046.ab1   263 
  554    BE490274Ld06P129C04P129C101F1_046.ab1   402 
  558  C BE490274Ld06P129C04P129C101R1_046.ab1   191 
  578    BE490274Ld06P129C04P129C101F1_046.ab1   426 
  594  C BE490274Ld06P129C04P129C101R1_046.ab1   155 
  610    BE490274Ld06P129C04P129C101F1_046.ab1   458 
  618  C BE490274Ld06P129C04P129C101R1_046.ab1   131 
  634    BE490274Ld06P129C04P129C101F1_046.ab1   482 
  650  C BE490274Ld06P129C04P129C101R1_046.ab1    99 
  662    BE490274Ld06P129C04P129C101F1_046.ab1   510 
  682  C BE490274Ld06P129C04P129C101R1_046.ab1    67 
  690    BE490274Ld06P129C04P129C101F1_046.ab1   538 
Contig length: old 924, new 924

Contig length: old 924, new 924
New start: 0