No. words: 1525; after pruning: 1499


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:600)  576  0.00 0.17 0.00  BE490274Ld10P129C04P129C101F1_038.ab1        1   601 (176)  C BE490274Ld10P129C04P129C101R1_038.ab1   (146)   602     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C BE490274Ld10P129C04P129C101R1_038.ab1   748 
  214    BE490274Ld10P129C04P129C101F1_038.ab1    67 
  222  C BE490274Ld10P129C04P129C101R1_038.ab1   527 
  226    BE490274Ld10P129C04P129C101F1_038.ab1    79 
  234  C BE490274Ld10P129C04P129C101R1_038.ab1   515 
  238    BE490274Ld10P129C04P129C101F1_038.ab1    91 
  250  C BE490274Ld10P129C04P129C101R1_038.ab1   499 
  262    BE490274Ld10P129C04P129C101F1_038.ab1   115 
  282  C BE490274Ld10P129C04P129C101R1_038.ab1   467 
  294    BE490274Ld10P129C04P129C101F1_038.ab1   147 
  302  C BE490274Ld10P129C04P129C101R1_038.ab1   447 
  306    BE490274Ld10P129C04P129C101F1_038.ab1   159 
  318  C BE490274Ld10P129C04P129C101R1_038.ab1   431 
  326    BE490274Ld10P129C04P129C101F1_038.ab1   179 
  446  C BE490274Ld10P129C04P129C101R1_038.ab1   303 
  454    BE490274Ld10P129C04P129C101F1_038.ab1   307 
  466  C BE490274Ld10P129C04P129C101R1_038.ab1   283 
  470    BE490274Ld10P129C04P129C101F1_038.ab1   323 
  486  C BE490274Ld10P129C04P129C101R1_038.ab1   263 
  506    BE490274Ld10P129C04P129C101F1_038.ab1   359 
  526  C BE490274Ld10P129C04P129C101R1_038.ab1   223 
  546    BE490274Ld10P129C04P129C101F1_038.ab1   399 
  562  C BE490274Ld10P129C04P129C101R1_038.ab1   187 
  586    BE490274Ld10P129C04P129C101F1_038.ab1   439 
  594  C BE490274Ld10P129C04P129C101R1_038.ab1   155 
  602    BE490274Ld10P129C04P129C101F1_038.ab1   455 
  618  C BE490274Ld10P129C04P129C101R1_038.ab1   131 
  634    BE490274Ld10P129C04P129C101F1_038.ab1   487 
  654  C BE490274Ld10P129C04P129C101R1_038.ab1    95 
  666    BE490274Ld10P129C04P129C101F1_038.ab1   519 
  678  C BE490274Ld10P129C04P129C101R1_038.ab1    71 
  686    BE490274Ld10P129C04P129C101F1_038.ab1   539 
Contig length: old 924, new 924

Contig length: old 924, new 924
New start: 0