No. words: 1510; after pruning: 1484


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.7 (1,1:691)  591  0.95 0.00 0.00  BE490274Ld12P129C04P129C101F1_034.ab1       59   692 (184)  C BE490274Ld12P129C04P129C101R1_034.ab1   (0)   634     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1    BE490274Ld12P129C04P129C101F1_034.ab1     1 
  342  C BE490274Ld12P129C04P129C101R1_034.ab1   351 
  350    BE490274Ld12P129C04P129C101F1_034.ab1   350 
  422  C BE490274Ld12P129C04P129C101R1_034.ab1   271 
  434    BE490274Ld12P129C04P129C101F1_034.ab1   434 
  458  C BE490274Ld12P129C04P129C101R1_034.ab1   235 
  490    BE490274Ld12P129C04P129C101F1_034.ab1   490 
  510  C BE490274Ld12P129C04P129C101R1_034.ab1   183 
  562    BE490274Ld12P129C04P129C101F1_034.ab1   562 
  649  C BE490274Ld12P129C04P129C101R1_034.ab1    44 
  653    BE490274Ld12P129C04P129C101F1_034.ab1   653 
Contig length: old 876, new 876

Contig length: old 876, new 876
New start: 0 
S Change at: 83; seg lengths: entry 1, contig 1