No. words: 1286; after pruning: 1260


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:595)  566  0.00 0.34 0.00  BE490274Tu01P129C04P129C101F1_080.ab1        1   595 (46)  C BE490274Tu01P129C04P129C101R1_080.ab1   (48)   597     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE490274Tu01P129C04P129C101R1_080.ab1   645 
   91    BE490274Tu01P129C04P129C101F1_080.ab1    41 
   99  C BE490274Tu01P129C04P129C101R1_080.ab1   547 
  123    BE490274Tu01P129C04P129C101F1_080.ab1    73 
  127  C BE490274Tu01P129C04P129C101R1_080.ab1   519 
  135    BE490274Tu01P129C04P129C101F1_080.ab1    85 
  139  C BE490274Tu01P129C04P129C101R1_080.ab1   507 
  499    BE490274Tu01P129C04P129C101F1_080.ab1   449 
  507  C BE490274Tu01P129C04P129C101R1_080.ab1   139 
  587    BE490274Tu01P129C04P129C101F1_080.ab1   537 
  599  C BE490274Tu01P129C04P129C101R1_080.ab1    47 
  607    BE490274Tu01P129C04P129C101F1_080.ab1   557 
Contig length: old 690, new 691

Contig length: old 691, new 691
New start: 0