No. words: 1286; after pruning: 1260


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:596)  567  0.00 0.34 0.00  BE490274Tu02P129C04P129C101F1_078.ab1        1   596 (45)  C BE490274Tu02P129C04P129C101R1_078.ab1   (47)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE490274Tu02P129C04P129C101R1_078.ab1   645 
   94    BE490274Tu02P129C04P129C101F1_078.ab1    45 
   98  C BE490274Tu02P129C04P129C101R1_078.ab1   548 
  122    BE490274Tu02P129C04P129C101F1_078.ab1    73 
  126  C BE490274Tu02P129C04P129C101R1_078.ab1   520 
  130    BE490274Tu02P129C04P129C101F1_078.ab1    81 
  138  C BE490274Tu02P129C04P129C101R1_078.ab1   508 
  554    BE490274Tu02P129C04P129C101F1_078.ab1   505 
  558  C BE490274Tu02P129C04P129C101R1_078.ab1    88 
  586    BE490274Tu02P129C04P129C101F1_078.ab1   537 
  594  C BE490274Tu02P129C04P129C101R1_078.ab1    52 
  602    BE490274Tu02P129C04P129C101F1_078.ab1   553 
Contig length: old 689, new 690

Contig length: old 690, new 690
New start: 0