No. words: 1087; after pruning: 1061


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:490)  475  0.00 0.41 0.20  BE490304Sn25P016B05P052C051F1_048.ab1        1   491 (56)  C BE490304Sn25P016B05P052C051R1_048.ab1   (48)   492     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE490304Sn25P016B05P052C051R1_048.ab1   540 
   68    BE490304Sn25P016B05P052C051F1_048.ab1    18 
  296  C BE490304Sn25P016B05P052C051R1_048.ab1   245 
  304    BE490304Sn25P016B05P052C051F1_048.ab1   254 
  312  C BE490304Sn25P016B05P052C051R1_048.ab1   229 
  324    BE490304Sn25P016B05P052C051F1_048.ab1   274 
  332  C BE490304Sn25P016B05P052C051R1_048.ab1   209 
  388    BE490304Sn25P016B05P052C051F1_048.ab1   338 
  392  C BE490304Sn25P016B05P052C051R1_048.ab1   149 
  396    BE490304Sn25P016B05P052C051F1_048.ab1   346 
  420  C BE490304Sn25P016B05P052C051R1_048.ab1   121 
  428    BE490304Sn25P016B05P052C051F1_048.ab1   378 
  436  C BE490304Sn25P016B05P052C051R1_048.ab1   105 
  440    BE490304Sn25P016B05P052C051F1_048.ab1   390 
  444  C BE490304Sn25P016B05P052C051R1_048.ab1    97 
  448    BE490304Sn25P016B05P052C051F1_048.ab1   398 
  464  C BE490304Sn25P016B05P052C051R1_048.ab1    77 
  476    BE490304Sn25P016B05P052C051F1_048.ab1   426 
  484  C BE490304Sn25P016B05P052C051R1_048.ab1    57 
  488    BE490304Sn25P016B05P052C051F1_048.ab1   438 
  492  C BE490304Sn25P016B05P052C051R1_048.ab1    49 
  496    BE490304Sn25P016B05P052C051F1_048.ab1   446 
Contig length: old 596, new 597

Contig length: old 597, new 597
New start: 0