No. words: 1101; after pruning: 1075


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.7 (1,1:505)  487  0.20 0.40 0.20  BE490304Sn26P016B05P052C051F1_046.ab1        1   506 (43)  C BE490304Sn26P016B05P052C051R1_046.ab1   (45)   507     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE490304Sn26P016B05P052C051R1_046.ab1   552 
   66    BE490304Sn26P016B05P052C051F1_046.ab1    20 
  196  C BE490304Sn26P016B05P052C051R1_046.ab1   356 
  200    BE490304Sn26P016B05P052C051F1_046.ab1   154 
  204  C BE490304Sn26P016B05P052C051R1_046.ab1   348 
  208    BE490304Sn26P016B05P052C051F1_046.ab1   162 
  212  C BE490304Sn26P016B05P052C051R1_046.ab1   340 
  216    BE490304Sn26P016B05P052C051F1_046.ab1   170 
  224  C BE490304Sn26P016B05P052C051R1_046.ab1   328 
  228    BE490304Sn26P016B05P052C051F1_046.ab1   182 
  272  C BE490304Sn26P016B05P052C051R1_046.ab1   280 
  276    BE490304Sn26P016B05P052C051F1_046.ab1   230 
  280  C BE490304Sn26P016B05P052C051R1_046.ab1   272 
  452    BE490304Sn26P016B05P052C051F1_046.ab1   406 
  456  C BE490304Sn26P016B05P052C051R1_046.ab1    96 
  476    BE490304Sn26P016B05P052C051F1_046.ab1   430 
  480  C BE490304Sn26P016B05P052C051R1_046.ab1    72 
  496    BE490304Sn26P016B05P052C051F1_046.ab1   450 
  500  C BE490304Sn26P016B05P052C051R1_046.ab1    52 
  520    BE490304Sn26P016B05P052C051F1_046.ab1   474 
  524  C BE490304Sn26P016B05P052C051R1_046.ab1    28 
  536    BE490304Sn26P016B05P052C051F1_046.ab1   490 
Contig length: old 595, new 595

Contig length: old 595, new 595
New start: 0