No. words: 1042; after pruning: 1016 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 6.4 (1,1:501) 476 0.40 0.40 0.40 BE490304Sn30P016B05P052C051F1_038.ab1 1 503 (2) C BE490304Sn30P016B05P052C051R1_038.ab1 (34) 503 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 236 nodes 120 str. conn. components Path 1 C BE490304Sn30P016B05P052C051R1_038.ab1 537 57 BE490304Sn30P016B05P052C051F1_038.ab1 21 81 C BE490304Sn30P016B05P052C051R1_038.ab1 457 105 BE490304Sn30P016B05P052C051F1_038.ab1 69 109 C BE490304Sn30P016B05P052C051R1_038.ab1 429 113 BE490304Sn30P016B05P052C051F1_038.ab1 77 129 C BE490304Sn30P016B05P052C051R1_038.ab1 409 137 BE490304Sn30P016B05P052C051F1_038.ab1 101 225 C BE490304Sn30P016B05P052C051R1_038.ab1 313 229 BE490304Sn30P016B05P052C051F1_038.ab1 193 233 C BE490304Sn30P016B05P052C051R1_038.ab1 305 241 BE490304Sn30P016B05P052C051F1_038.ab1 205 261 C BE490304Sn30P016B05P052C051R1_038.ab1 277 265 BE490304Sn30P016B05P052C051F1_038.ab1 229 305 C BE490304Sn30P016B05P052C051R1_038.ab1 233 509 BE490304Sn30P016B05P052C051F1_038.ab1 473 513 C BE490304Sn30P016B05P052C051R1_038.ab1 25 521 BE490304Sn30P016B05P052C051F1_038.ab1 485 Contig length: old 540, new 541 Contig length: old 541, new 541 New start: 0