No. words: 1080; after pruning: 1054


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.7 (1,1:490)  475  0.20 0.41 0.00  BE490304Sn31P016B05P052C051F1_036.ab1        1   490 (62)  C BE490304Sn31P016B05P052C051R1_036.ab1   (36)   492     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE490304Sn31P016B05P052C051R1_036.ab1   528 
   59    BE490304Sn31P016B05P052C051F1_036.ab1    21 
   63  C BE490304Sn31P016B05P052C051R1_036.ab1   466 
   67    BE490304Sn31P016B05P052C051F1_036.ab1    29 
  151  C BE490304Sn31P016B05P052C051R1_036.ab1   378 
  155    BE490304Sn31P016B05P052C051F1_036.ab1   117 
  335  C BE490304Sn31P016B05P052C051R1_036.ab1   194 
  363    BE490304Sn31P016B05P052C051F1_036.ab1   325 
  367  C BE490304Sn31P016B05P052C051R1_036.ab1   162 
  407    BE490304Sn31P016B05P052C051F1_036.ab1   369 
  411  C BE490304Sn31P016B05P052C051R1_036.ab1   118 
  431    BE490304Sn31P016B05P052C051F1_036.ab1   393 
  435  C BE490304Sn31P016B05P052C051R1_036.ab1    94 
  467    BE490304Sn31P016B05P052C051F1_036.ab1   429 
  471  C BE490304Sn31P016B05P052C051R1_036.ab1    58 
  483    BE490304Sn31P016B05P052C051F1_036.ab1   445 
  487  C BE490304Sn31P016B05P052C051R1_036.ab1    42 
  499    BE490304Sn31P016B05P052C051F1_036.ab1   461 
  503  C BE490304Sn31P016B05P052C051R1_036.ab1    26 
  511    BE490304Sn31P016B05P052C051F1_036.ab1   473 
  515  C BE490304Sn31P016B05P052C051R1_036.ab1    14 
  519    BE490304Sn31P016B05P052C051F1_036.ab1   481 
Contig length: old 589, new 590

Contig length: old 590, new 590
New start: 0