No. words: 1087; after pruning: 1061


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.5 (1,1:501)  477  0.00 0.60 0.40  BE490304Ta11P016B05P052C051F1_028.ab1        2   503 (48)  C BE490304Ta11P016B05P052C051R1_028.ab1   (33)   503     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE490304Ta11P016B05P052C051R1_028.ab1   536 
   56    BE490304Ta11P016B05P052C051F1_028.ab1    22 
   92  C BE490304Ta11P016B05P052C051R1_028.ab1   444 
   96    BE490304Ta11P016B05P052C051F1_028.ab1    62 
  140  C BE490304Ta11P016B05P052C051R1_028.ab1   396 
  148    BE490304Ta11P016B05P052C051F1_028.ab1   114 
  332  C BE490304Ta11P016B05P052C051R1_028.ab1   204 
  416    BE490304Ta11P016B05P052C051F1_028.ab1   382 
  420  C BE490304Ta11P016B05P052C051R1_028.ab1   116 
  440    BE490304Ta11P016B05P052C051F1_028.ab1   406 
  448  C BE490304Ta11P016B05P052C051R1_028.ab1    88 
  464    BE490304Ta11P016B05P052C051F1_028.ab1   430 
  468  C BE490304Ta11P016B05P052C051R1_028.ab1    68 
  496    BE490304Ta11P016B05P052C051F1_028.ab1   462 
Contig length: old 585, new 585

Contig length: old 585, new 585
New start: 0