No. words: 1090; after pruning: 1064


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 6.5 (1,1:500)  486  0.00 0.40 0.00  BE490304Ta12P016B05P052C051F1_026.ab1        2   498 (58)  C BE490304Ta12P016B05P052C051R1_026.ab1   (33)   501     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE490304Ta12P016B05P052C051R1_026.ab1   534 
   56    BE490304Ta12P016B05P052C051F1_026.ab1    22 
   60  C BE490304Ta12P016B05P052C051R1_026.ab1   475 
   68    BE490304Ta12P016B05P052C051F1_026.ab1    34 
   80  C BE490304Ta12P016B05P052C051R1_026.ab1   455 
   84    BE490304Ta12P016B05P052C051F1_026.ab1    50 
   88  C BE490304Ta12P016B05P052C051R1_026.ab1   447 
   96    BE490304Ta12P016B05P052C051F1_026.ab1    62 
  108  C BE490304Ta12P016B05P052C051R1_026.ab1   427 
  112    BE490304Ta12P016B05P052C051F1_026.ab1    78 
  176  C BE490304Ta12P016B05P052C051R1_026.ab1   359 
  180    BE490304Ta12P016B05P052C051F1_026.ab1   146 
  184  C BE490304Ta12P016B05P052C051R1_026.ab1   351 
  188    BE490304Ta12P016B05P052C051F1_026.ab1   154 
  220  C BE490304Ta12P016B05P052C051R1_026.ab1   315 
  228    BE490304Ta12P016B05P052C051F1_026.ab1   194 
  308  C BE490304Ta12P016B05P052C051R1_026.ab1   227 
  312    BE490304Ta12P016B05P052C051F1_026.ab1   278 
  324  C BE490304Ta12P016B05P052C051R1_026.ab1   211 
  508    BE490304Ta12P016B05P052C051F1_026.ab1   474 
Contig length: old 589, new 590

Contig length: old 590, new 590
New start: 0